Publications
- Drosophila p120-catenin is crucial for endocytosis of the dynamic E-cadherin–Bazooka complex
Bulgakova NA Brown NH
Journal of Cell Science, The Company of Biologists vol. 129 (3), 477-482.
23-12-2015 - Methylation of RNA polymerase II non-consensus Lysine residues marks early transcription in mammalian cells
Dias JD Rito T Torlai Triglia E Kukalev A Ferrai C Chotalia M Kimura H
Elife, Elife vol. 4, e11215-e11215.
19-12-2015 - Distortions of the Xanthophylls Caused by Interactions with Neighboring Pigments and the LHCII Protein Are Crucial for Studying Energy Transfer Pathways within the Complex
Fox KF Bricker WP Lo C Duffy CDP
The Journal of Physical Chemistry B, American Chemical Society (Acs) vol. 119 (51), 15550-15560.
10-12-2015 - A central role for TOR signalling in a yeast model for juvenile CLN3 disease
Bond ME Brown R Rallis C Bähler J
Microbial Cell, Shared Science Publishers Og vol. 2 (12)
07-12-2015 - Opsin evolution in the Ambulacraria
D'Aniello S Delroisse J Valero-Gracia A Lowe EK Byrne M Cannon JT Halanych KM Elphick MR et al.
Marine Genomics vol. 24, 177-183.
01-12-2015 - Crystal structure of CobK reveals strand-swapping between Rossmann-fold domains and molecular basis of the reduced precorrin product trap
Gu S Sushko O Deery E
Scientific Reports, Springer Nature vol. 5 (1)
30-11-2015 - ATM Localization and Heterochromatin Repair Depend on Direct Interaction of the 53BP1-BRCT2 Domain with γH2AX
Baldock RA Day M Wilkinson OJ Cloney R Jeggo PA Oliver AW Watts FZ Pearl LH
Cell Reports, Elsevier vol. 13 (10), 2081-2089.
25-11-2015 - An intact light harvesting complex I antenna system is required for complete state transitions in Arabidopsis
Benson SL Maheswaran P Ware MA Hunter CN Horton P Jansson S Ruban AV Johnson MP
Nature Plants, Springer Nature vol. 1 (12)
23-11-2015 - Novel application of heuristic optimisation enables the creation and thorough evaluation of robust support vector machine ensembles for machine learning applications
Chatzimichali EA
Metabolomics, Springer Nature vol. 12 (1)
21-11-2015 - Thylakoid membrane function in heterocysts
Magnuson A Cardona T
Biochimica Et Biophysica Acta, Elsevier vol. 1857 (3), 309-319.
09-11-2015 - Motility in cyanobacteria: polysaccharide tracks and Type IV pilus motors
Wilde A Mullineaux CW
Molecular Microbiology, Wiley vol. 98 (6), 998-1001.
06-11-2015 - Super-Resolution Microscopy: From Single Molecules to Supramolecular Assemblies
Sydor AM Czymmek KJ Puchner EM Mennella V
Trends in Cell Biology, Elsevier vol. 25 (12), 730-748.
03-11-2015 - Visualizing the dynamic structure of the plant photosynthetic membrane
Ruban AV Johnson MP
Nature Plants, Springer Nature vol. 1 (11)
03-11-2015 - Cell-based screens and phenomics with fission yeast
Rallis C Bähler J
Critical Reviews in Biochemistry and Molecular Biology, Taylor & Francis vol. 51 (2), 86-95.
02-11-2015 - Binding loci of RelA-containing nuclear factor-kappaB dimers in promoter regions of PHM1-31 myometrial smooth muscle cells.
Cookson VJ Waite SL Hurd PJ Chapman NR
Mol Hum Reprod vol. 21 (11), 865-883.
01-11-2015 - PsbS protein modulates non-photochemical chlorophyll fluorescence quenching in membranes depleted of photosystems
Ware MA Giovagnetti V Belgio E Ruban AV
Journal of Photochemistry and Photobiology B Biology vol. 152, 301-307.
01-11-2015 - Opsin evolution in the Ambulacraria
D'Aniello S Delroisse J Valero-Gracia A Lowe EK Byrne M Cannon JT Halanych KM Elphick MR et al.
Marine Genomics, Elsevier vol. 24, 177-183.
23-10-2015 - Identification of a neuropeptide precursor protein that gives rise to a “cocktail” of peptides that bind Cu(II) and generate metal-linked dimers
Jones CE Zandawala M Semmens DC Anderson S Hanson GR Janies DA Elphick MR
Biochimica Et Biophysica Acta, Elsevier vol. 1860 (1), 57-66.
22-10-2015 - Developmental role of acetylcholinesterase in impulse control in zebrafish
Parker MO Brock AJ Sudwarts A Teh M-T Combe FJ Brennan CH
Frontiers in Behavioral Neuroscience, Frontiers vol. 9
16-10-2015 - Suppression of TGFβ and Angiogenesis by Type VII Collagen in Cutaneous SCC
Martins VL Caley MP Moore K Szentpetery Z Marsh ST Murrell DF Kim MH Avari M et al.
Journal of The National Cancer Institute, Oxford University Press (OUP) vol. 108 (1)
16-10-2015 - Characterisation of a GnRH-type signalling system in an echinoderm
Tian S Zandawala M Egertova M Beets I Slade SE Scrivens JH Elphick MR
Endocrine Abstracts, Bioscientifica
12-10-2015 - Discovery and localisation of the expression of calcitonin-type and CRH-type neuropeptide precursors in an echinoderm
Cai W Egertova M Badi Y Semmens D Elphick M
Endocrine Abstracts, Bioscientifica
12-10-2015 - A Semi-Supervised Approach for Refining Transcriptional Signatures of Drug Response and Repositioning Predictions
Iorio F Shrestha RL Levin N Boilot V Draviam VM
Plos One, Public Library of Science (Plos) vol. 10 (10)
09-10-2015 - Modeling of Noisy Spindle Dynamics Reveals Separable Contributions to Achieving Correct Orientation
Corrigan AM Shrestha R Draviam VM Donald AM
Biophysical Journal, Elsevier vol. 109 (7), 1398-1409.
01-10-2015 - Evolution and development of the adelphophagic, intracapsular Schmidt’s larva of the nemertean Lineus ruber
Martín-Durán JM Vellutini BC
Evodevo, Springer Nature vol. 6 (1)
28-09-2015 - Structural insights into the loss of catalytic competence in pectate lyase activity at low pH
Ali S Teixeira S Pickersgill RW
Febs Letters, Wiley vol. 589 (21), 3242-3246.
28-09-2015 - Visualizing the Photosynthetic Membrane Proteins in Situ: Atomic Force Microscopy
Ruban AV
Plant Physiology, Oxford University Press (OUP) vol. 169 (2), 910-910.
28-09-2015 - Truncated Amyloid-β(11–40/42) from Alzheimer Disease Binds Cu2+ with a Femtomolar Affinity and Influences Fiber Assembly*
Barritt JD Viles JH
Journal of Biological Chemistry, Elsevier vol. 290 (46), 27791-27802.
25-09-2015 - Horizontal transfer of facultative endosymbionts is limited by host relatedness
Łukasik P Guo H van Asch M Henry LM Godfray HCJ Ferrari J
Evolution, Oxford University Press (OUP) vol. 69 (10), 2757-2766.
24-09-2015 - Discerning the effects of photoinhibition and photoprotection on the rate of oxygen evolution in Arabidopsis leaves
Giovagnetti V Ruban AV
Journal of Photochemistry and Photobiology B Biology, Elsevier vol. 152 (Pt B), 272-278.
15-09-2015 - Dissipative pathways in the photosystem-II antenna in plants
Duffy CDP Ruban AV
Journal of Photochemistry and Photobiology B Biology, Elsevier vol. 152 (Pt B), 215-226.
15-09-2015 - New Unconventional Airship Concept by Morphing the Lenticular Shape
Ceruti A Marzocca P
SAE Technical Paper Series. vol. 1
15-09-2015 - The mzqLibrary - An open source Java library supporting the HUPO-PSI quantitative proteomics standard
Qi D Zhang H Fan J Perkins S Pisconti A Simpson DM Bessant C
Proteomics vol. 15 (18), 3152-3162.
01-09-2015 - Assessment of the impact of photosystem I chlorophyll fluorescence on the pulse-amplitude modulated quenching analysis in leaves of Arabidopsis thaliana
Giovagnetti V Ware MA Ruban AV
Photosynthesis Research vol. 125 (1-2), 179-189.
17-08-2015 - Galaxy Integrated Omics: Web-based Standards-Compliant Workflows for Proteomics Informed by Transcriptomics*[S]
Fan J Saha S Barker G Heesom KJ Ghali F Jones AR
Molecular & Cellular Proteomics, Elsevier vol. 14 (11), 3087-3093.
12-08-2015 - Phylogeny of Echinoderm Hemoglobins
Christensen AB Herman JL Elphick MR Kober KM Janies D Linchangco G Semmens DC Bailly X et al.
Plos One, Public Library of Science (Plos) vol. 10 (8)
06-08-2015 - Synthetic physical interactions map kinetochore regulators and regions sensitive to constitutive Cdc14 localization
Ólafsson G
Proceedings of The National Academy of Sciences of The United States of America, Proceedings of The National Academy of Sciences vol. 112 (33), 10413-10418.
03-08-2015 - Sub-Terahertz Spectroscopy as a Probe for Protein Stability in an Ionic Environment
Sushko O Qiu J Dubrovka R
2015 40th International Conference on Infrared, Millimeter, and Terahertz waves (IRMMW-THz)., 1-2.
01-08-2015 - PsbS protein modulates non-photochemical chlorophyll fluorescence quenching in membranes depleted of photosystems
Ware MA Giovagnetti V Belgio E Ruban AV
Journal of Photochemistry and Photobiology B Biology, Elsevier vol. 152 (Pt B), 301-307.
26-07-2015 - Fluorescent foci quantitation for high-throughput analysis.
Ledesma-Fernández E Thorpe PH
Journal of Biological Methods, Journal of Biological Methods vol. 2 (2)
19-07-2015 - Quantifying the dynamics of light tolerance in Arabidopsis plants during ontogenesis
Carvalho FEL Ware MA Ruban AV
Plant Cell & Environment, Wiley vol. 38 (12), 2603-2617.
14-07-2015 - The mzqLibrary – An open source Java library supporting the HUPO‐PSI quantitative proteomics standard
Qi D Zhang H Fan J Perkins S Pisconti A Simpson DM Hubbard S
Proteomics, Wiley vol. 15 (18), 3152-3162.
14-07-2015 - A Comparison of Three Fluorophores for the Detection of Amyloid Fibers and Prefibrillar Oligomeric Assemblies. ThT (Thioflavin T); ANS (1-Anilinonaphthalene-8-sulfonic Acid); and bisANS (4,4′-Dianilino-1,1′-binaphthyl-5,5′-disulfonic Acid)
Younan ND
Biochemistry, American Chemical Society (Acs) vol. 54 (28), 4297-4306.
10-07-2015 - Centromere protein F includes two sites that couple efficiently to depolymerizing microtubules
Volkov VA Grissom PM Arzhanik VK Zaytsev AV McClure-Begley T Old WM
Journal of Cell Biology, Rockefeller University Press vol. 209 (6), 813-828.
22-06-2015 - Genome wide interactions of wild-type and activator bypass forms of σ54
Schaefer J Engl C Lawton E
Nucleic Acids Research vol. 43 (15), 7280-7291.
16-06-2015 - Correction: Sustained Action of Developmental Ethanol Exposure on the Cortisol Response to Stress in Zebrafish Larvae and Adults
Baiamonte M Brennan CH Vinson GP
Plos One, Public Library of Science (Plos) vol. 10 (5)
08-05-2015 - Getting to the bottom of anal evolution
Hejnol A
Zoologischer Anzeiger, Elsevier vol. 256, 61-74.
01-05-2015 - Speed–accuracy trade-offs and individually consistent decision making by individuals and dyads of zebrafish in a colour discrimination task
Wang M-Y Brennan CH Lachlan RF Chittka L
Animal Behaviour, Elsevier vol. 103, 277-283.
01-05-2015 - Light‐harvesting superstructures of green plant chloroplasts lacking photosystems
Belgio E Ungerer P Ruban AV
Plant Cell & Environment, Wiley vol. 38 (10), 2035-2047.
23-04-2015 - The study of Priapulus caudatus reveals conserved molecular patterning underlying different gut morphogenesis in the Ecdysozoa
Martín-Durán JM Hejnol A
Bmc Biology, Springer Nature vol. 13 (1)
21-04-2015 - Widespread exon skipping triggers degradation by nuclear RNA surveillance in fission yeast
Bitton DA Atkinson SR Rallis C Ellis DA Chen YYC Malecki M Codlin S Cotobal C et al.
Genome Research, Cold Spring Harbor Laboratory vol. 25 (6), 884-896.
16-04-2015 - Insect life history and the evolution of bacterial mutualism
Henry LM Maiden MCJ Ferrari J Godfray HCJ
Ecology Letters, Wiley vol. 18 (6), 516-525.
13-04-2015 - Sustained Action of Developmental Ethanol Exposure on the Cortisol Response to Stress in Zebrafish Larvae and Adults
Baiamonte M Brennan CH Vinson GP
Plos One, Public Library of Science (Plos) vol. 10 (4)
13-04-2015 - Discovery of sea urchin NGFFFamide receptor unites a bilaterian neuropeptide family
Semmens DC Beets I Rowe ML Blowes LM Oliveri P Elphick MR
Open Biology, The Royal Society vol. 5 (4)
01-04-2015 - Global Diversity Lines–A Five-Continent Reference Panel of Sequenced Drosophila melanogaster Strains
Grenier JK Arguello JR Moreira MC Gottipati S Hackett SR Boughton R
G3: Genes, Genomes, Genetics, Oxford University Press (OUP) vol. 5 (4), 593-603.
01-04-2015 - Structural biology of the Gram-negative bacterial conjugation systems
Ilangovan A Connery S Waksman G
Trends in Microbiology, Elsevier vol. 23 (5), 301-310.
27-03-2015 - Amyloid β Protein and Alzheimer’s Disease: When Computer Simulations Complement Experimental Studies
Nasica-Labouze J Nguyen PH Sterpone F Berthoumieu O Buchete N-V Coté S De Simone A Faller P et al.
Chemical Reviews, American Chemical Society (Acs) vol. 115 (9), 3518-3563.
19-03-2015 - Photosynthetic Constraints on Fuel from Microbes
Cotton CAR Douglass JS De Causmaecker S Brinkert K Cardona T Fantuzzi A Rutherford AW Murray JW
Frontiers in Bioengineering and Biotechnology, Frontiers vol. 3
18-03-2015 - Intercellular Diffusion of a Fluorescent Sucrose Analog via the Septal Junctions in a Filamentous Cyanobacterium
Nürnberg DJ Mariscal V Bornikoel J Nieves-Morión M Krauß N Herrero A Maldener I Flores E
Mbio, American Society For Microbiology vol. 6 (2), 10.1128/mbio.02109-10.1128/mbio.02114.
17-03-2015 - Cannabinoid receptor-interacting protein Crip1a modulates CB1 receptor signaling in mouse hippocampus
Guggenhuber S Alpar A Chen R Schmitz N Wickert M Mattheus T Harasta AE Purrio M et al.
Brain Structure and Function, Springer Nature vol. 221 (4), 2061-2074.
15-03-2015 - Arginine methylation and citrullination of splicing factor proline- and glutamine-rich (SFPQ/PSF) regulates its association with mRNA.
Snijders AP Hautbergue GM Bloom A Williamson JC Minshull TC Phillips HL Mihaylov SR Gjerde DT et al.
Rna vol. 21 (3), 347-359.
01-03-2015 - PilB localization correlates with the direction of twitching motility in the cyanobacterium Synechocystis sp. PCC 6803
Schuergers N Nürnberg DJ Wallner T Mullineaux CW
Microbiology, Microbiology Society vol. 161 (5), 960-966.
25-02-2015 - Photoprotective capacity of non-photochemical quenching in plants acclimated to different light intensities
Ware MA Belgio E Ruban AV
Photosynthesis Research, Springer Nature vol. 126 (2-3), 261-274.
22-02-2015 - Cu²⁺ accentuates distinct misfolding of Aβ₁₋₄₀ and Aβ₁₋₄₂ peptides, and potentiates membrane disruption.
Matheou CJ Younan ND Viles JH
Biochemical Journal, Portland Press vol. 466 (2), 233-242.
20-02-2015 - Sub‐cellular location of FtsH proteases in the cyanobacterium Synechocystis sp. PCC 6803 suggests localised PSII repair zones in the thylakoid membranes
Sacharz J Bryan SJ Yu J Spence EM Nixon PJ
Molecular Microbiology, Wiley vol. 96 (3), 448-462.
11-02-2015 - The genomic and phenotypic diversity of Schizosaccharomyces pombe
Jeffares DC Rallis C Rieux A Speed D Převorovský M Mourier T Marsellach FX Iqbal Z et al.
Nature Genetics, Springer Nature vol. 47 (3), 235-241.
09-02-2015 - Cannabinoid Receptor–Interacting Protein 1a Modulates CB1 Receptor Signaling and Regulation
Smith TH Blume LC Straiker A Cox JO David BG McVoy JRS Sayers KW Poklis JL et al.
Molecular Pharmacology, Elsevier vol. 87 (4), 747-765.
05-02-2015 - Origin and Evolution of Water Oxidation before the Last Common Ancestor of the Cyanobacteria
Cardona T Murray JW Rutherford AW
Molecular Biology and Evolution, Oxford University Press (OUP) vol. 32 (5), 1310-1328.
04-02-2015 - Carbon paper electrode modified by goethite nanowhiskers promotes bacterial extracellular electron transfer
Wang L Su L Chen H Yin T Lin Z Lin X yuan C Fu D
Materials Letters, Elsevier vol. 141, 311-314.
01-02-2015 - Molecular psychiatry of zebrafish.
Stewart AM Ullmann JFP Norton WHJ Parker MO Brennan CH Gerlai R Kalueff AV
Mol Psychiatry vol. 20 (1), 2-17.
01-02-2015 - Assessment of the impact of photosystem I chlorophyll fluorescence on the pulse-amplitude modulated quenching analysis in leaves of Arabidopsis thaliana
Giovagnetti V Ware MA Ruban AV
Photosynthesis Research, Springer Nature vol. 125 (1-2), 179-189.
23-01-2015 - A proteomic study of mitotic phase-specific interactors of EB1 reveals a role for SXIP-mediated protein interactions in anaphase onset
Tamura N Simon JE Nayak A Shenoy R Hiroi N Funahashi A Draviam VM
Biology Open, The Company of Biologists vol. 4 (2), 155-169.
16-01-2015 - PAXX, a paralog of XRCC4 and XLF, interacts with Ku to promote DNA double-strand break repair
Ochi T Blackford AN Coates J Jhujh S Mehmood S Tamura N Travers J Draviam VM et al.
Science, American Association For The Advancement of Science (Aaas) vol. 347 (6218), 185-188.
09-01-2015 - A complex relationship between motor activity, cytoplasmic flows and the organisation of the actin and microtubule cytoskeletons
Palacios IM Drechsler M Ganguly S
MOLECULAR BIOLOGY OF THE CELL. vol. 26
01-01-2015 - A complex relationship between motor activity, cytoplasmic flows and the organisation of the actin and microtubule cytoskeletons.
Palacios IM Drechsler M
MOLECULAR BIOLOGY OF THE CELL. vol. 26
01-01-2015 - Alpha-spectrin is essential for septate junction formation and columnarization, but not for proliferation control, in the follicular epithelium
Palacios IM Martin-Bermudo M
MOLECULAR BIOLOGY OF THE CELL. vol. 26
01-01-2015 - An ‘all pigment’ model of excitation quenching in LHCII
Chmeliov J Bricker WP Lo C Jouin E Valkunas L Ruban AV Duffy CDP
Physical Chemistry Chemical Physics, Royal Society of Chemistry (Rsc) vol. 17 (24), 15857-15867.
01-01-2015 - Chapter 8 Subdiffraction resolution microscopy methods for analyzing centrosomes organization
Mennella V Hanna R Kim M
Methods in Cell Biology, Elsevier vol. 129, 129-152.
01-01-2015 - Comparison of GC-MS, HPLC-MS and SIFT-MS in conjunction with multivariate classification for the diagnosis of Crohn's disease in urine
Cauchi M Fowler DP Walton C Turner C Waring RH Teale P Bessant C
Analytical Methods, Royal Society of Chemistry (Rsc) vol. 7 (19), 8379-8385.
01-01-2015 - Evolution under the sun: optimizing light harvesting in photosynthesis.
Ruban AV
J Exp Bot vol. 66 (1), 7-23.
01-01-2015 - High-speed microscopy with an electrically tunable lens to image the dynamics of in vivo molecular complexes
Nakai Y Ozeki M Hiraiwa T Funahashi A Hiroi N Taniguchi A Nonaka S Boilot V et al.
Review of Scientific Instruments, Aip Publishing vol. 86 (1)
01-01-2015 - In Vitro and In Vivo Methodologies for Studying the Sigma 54-Dependent Transcription
Buck M Engl C Joly N Jovanovic G Jovanovic M Lawton E McDonald C Schumacher J et al.
Methods in Molecular Biology, Springer Nature vol. 1276, 53-79.
01-01-2015 - Increasing power density and dye decolorization of an X-3B-fed microbial fuel cell via TiO 2 photocatalysis pretreatment
Su L Fan X Yin T Chen H Lin X Yuan C Fu D
Rsc Advances, Royal Society of Chemistry (Rsc) vol. 5 (102), 83906-83913.
01-01-2015 - Parallel Profiling of Fission Yeast Deletion Mutants for Proliferation and for Lifespan During Long-Term Quiescence
Sideri T Rallis C Lages BM Suo F Rodríguez-López M
G3: Genes, Genomes, Genetics, Oxford University Press (OUP) vol. 5 (1), 145-155.
01-01-2015 - Reconstructing SALMFamide Neuropeptide Precursor Evolution in the Phylum Echinodermata: Ophiuroid and Crinoid Sequence Data Provide New Insights.
Elphick MR Semmens DC Blowes LM Levine J Lowe CJ Arnone MI Clark MS
Front Endocrinol (Lausanne) vol. 6
01-01-2015