Publications
- Evaluation of Epigenetic Age Acceleration Scores and Their Associations with CVD-Related Phenotypes in a Population Cohort
Chervova O Chernysheva E Panteleeva K Widayati TA Hrbkova N Schneider J Maximov V Ryabikov A et al.
Biology, Mdpi vol. 12 (1)
30-12-2022 - Discovery and functional characterization of neuropeptides in crinoid echinoderms
Aleotti A Wilkie IC Yañez-Guerra LA Gattoni G Rahman TA Wademan RF Ahmad Z Ivanova DA et al.
Frontiers in Neuroscience, Frontiers Media Sa vol. 16
13-12-2022 - Genomic signals of local adaptation and hybridization in Asian white birch
Nocchi G Wang J Yang L Ding J Gao Y
Molecular Ecology, Wiley vol. 32 (3), 595-612.
02-12-2022 - baz1b loss-of-function in zebrafish produces phenotypic alterations consistent with the domestication syndrome
Torres-Pérez JV Anagianni S Mech AM Havelange W García-González J Fraser SE Vallortigara G Brennan CH
Iscience, Elsevier vol. 26 (1)
01-12-2022 - PCR3 Assessing Concept Saturation and Sample Representativeness When Using Social Media Data to Inform Concept Elicitation Studies
Bessant C Bridges Y Tahsin A Abdollahyan M Smeraldi F
Value in Health, Elsevier vol. 25 (12)
01-12-2022 - Explaining the influence of non‐shared environment (NSE) on symptoms of behaviour problems from preschool to adulthood: mind the missing NSE gap
Gidziela A Malanchini M Rimfeld K McMillan A Ronald A Viding E Pike A Asbury K et al.
Journal of Child Psychology and Psychiatry, Wiley vol. 64 (5), 747-757.
27-11-2022 - Non-Lethal Detection of Frog Virus 3-Like (RUK13) and Common Midwife Toad Virus-Like (PDE18) Ranaviruses in Two UK-Native Amphibian Species
Ford CE Brookes LM Skelly E Sergeant C Jordine T Balloux F Nichols RA Garner TWJ
Viruses, Mdpi vol. 14 (12)
25-11-2022 - Single-cell phenotypes of peripheral blood immune cells in early and late stages of non-alcoholic fatty liver disease
Waller KJ Saihi H Li W Brindley JH De Jong A Syn W-K Bessant C Alazawi W
Clinical and Molecular Hepatology, The Korean Association For The Study of The Liver vol. 29 (2), 417-432.
21-11-2022 - The challenge of demonstrating contemporary natural selection on polygenic quantitative traits in the wild
Buggs RJA
Molecular Ecology, Wiley vol. 31 (24), 6383-6386.
15-11-2022 - Chromatin accessibility-based characterisation of brain gene regulatory networks in three distinct honey bee polyphenisms
Lowe R Wojciechowski M Ellis N Hurd PJ
Nucleic Acids Research, Oxford University Press (OUP) vol. 50 (20), 11550-11562.
04-11-2022 - Genetic Variance in Conscientiousness Relates to Youth Psychopathology Beyond Executive Functions
Shields AN Malanchini M Vinnik L Tucker-Drob EM Harden KP Tackett JL
Journal of Psychopathology and Clinical Science, American Psychological Association (Apa) vol. 131 (8), 830-846.
01-11-2022 - The genetics of specific cognitive abilities
Procopio F Zhou Q Wang Z Gidziela A Rimfeld K Malanchini M Plomin R
Intelligence, Elsevier vol. 95
01-11-2022 - A zebrafish model of AIP loss of function
Wang X Leggieri A Anagianni S Brennan CH Korbonits M
Endocrine Abstracts, Bioscientifica
27-10-2022 - Local adaptation to hosts and parasitoids shape Hamiltonella defensa genotypes across aphid species
Wu T Monnin D Lee RAR Henry LM
Proceedings of The Royal Society B, The Royal Society vol. 289 (1985)
26-10-2022 - Comprehensive characterization of the Hsp70 interactome reveals novel client proteins and interactions mediated by posttranslational modifications
Nitika Zheng B Ruan L Kline JT Omkar S Sikora J Torres MT Takakuwa JE et al.
Plos Biology, Public Library of Science (Plos) vol. 20 (10)
21-10-2022 - The RNA repair proteins RtcAB regulate transcription activator RtcR via its CRISPR-associated Rossmann fold domain.
Kotta-Loizou I Giuliano MG Jovanovic M Schaefer J Ye F Zhang N Liu X Zhang X
Iscience, Cell Press, 105425-105425.
20-10-2022 - Safeguarding Imperiled Biodiversity and Evolutionary Processes in the Wallacea Center of Endemism
Struebig MJ Aninta SG Beger M Bani A Barus H Brace S Davies ZG De Brauwer M et al.
Bioscience vol. 72 (11), 1118-1130.
19-10-2022 - HMMploidy: inference of ploidy levels from short-read sequencing data
Soraggi S Rhodes J Altinkaya I Tarrant O Balloux F Fisher MC Fumagalli M
Peer Community Journal, Peer Community In vol. 2
14-10-2022 - Conserved roles for Hnf4 family transcription factors in zebrafish development and intestinal function
Heppert JK Lickwar CR Tillman MC Davis BR Lu H-Y Chen W
Genetics, Oxford University Press (OUP) vol. 222 (4), iyac133-iyac133.
11-10-2022 - Aerial Drone Surveys Reveal the Efficacy of a Protected Area Network for Marine Megafauna and the Value of Sea Turtles as Umbrella Species
Dickson LCD Negus SRB Eizaguirre C Katselidis KA
Drones, Mdpi vol. 6 (10)
07-10-2022 - An In-Laboratory Stressor Reveals Unique Genetic Variation in Child Cortisol Output
Raffington L Malanchini M Grotzinger AD Madole JW Engelhardt LE Sabhlok A Youn C Patterson MW et al.
Developmental Psychology, American Psychological Association (Apa) vol. 58 (10), 1832-1848.
01-10-2022 - VP.81 In vivo modulation of novel genetic modifiers for LAMA2-RD
Pini V Weisburd B Merteroglu M Sealy I White R Busch-Nentwich E Muntoni F
Neuromuscular Disorders, Elsevier vol. 32, s124-s125.
01-10-2022 - HAYSTAC: A Bayesian framework for robust and rapid species identification in high-throughput sequencing data
Dimopoulos EA Carmagnini A Velsko IM Warinner C Larson G
Plos Computational Biology, Public Library of Science (Plos) vol. 18 (9)
30-09-2022 - Gene–environment interaction using polygenic scores: Do polygenic scores for psychopathology moderate predictions from environmental risk to behavior problems?
Plomin R Gidziela A Malanchini M von Stumm S
Development and Psychopathology, Cambridge University Press (Cup) vol. 34 (5), 1816-1826.
23-09-2022 - ifCNV: A novel isolation-forest-based package to detect copy-number variations from various targeted NGS datasets
Cabello-Aguilar S Vendrell JA Van Goethem C Brousse M Gozé C
Molecular Therapy - Nucleic Acids, Elsevier vol. 30, 174-183.
22-09-2022 - Obituary: Michael C. Thorndyke (1946–2022)
Elphick MR Dupont S
Journal of The Marine Biological Association of The United Kingdom, Cambridge University Press (Cup), 1-3.
22-09-2022 - The Fox Gene Repertoire in the Annelid Owenia fusiformis Reveals Multiple Expansions of the foxQ2 Class in Spiralia
Seudre O Martín-Zamora FM Luqman I Carrillo-Baltodano AM
Genome Biology and Evolution, Oxford University Press (OUP) vol. 14 (10)
13-09-2022 - Molecular Origins of Transcriptional Heterogeneity in Diazotrophic Klebsiella oxytoca
Bashir T Brackston RD Waite C Kotta-Loizou I Engl C Schumacher J
Msystems, American Society For Microbiology vol. 7 (5), e00596-e00522.
08-09-2022 - The genomic history and global expansion of domestic donkeys
Todd ET Tonasso-Calvière L Chauvey L Schiavinato S Fages A Seguin-Orlando A Clavel P Khan N et al.
Science, American Association For The Advancement of Science (Aaas) vol. 377 (6611), 1172-1180.
08-09-2022 - DNA methyltransferase DNMT3A forms interaction networks with the CpG site and flanking sequence elements for efficient methylation
Dukatz M Dittrich M Stahl E Adam S de Mendoza A Bashtrykov P
Journal of Biological Chemistry, Elsevier vol. 298 (10)
05-09-2022 - Evolution and evolvability of photosystem II
Kim TD Oliver T Trinugroho JP Cordón-Preciado V Bianchini G Rutherford AW Sánchez-Baracaldo P Cardona T
Biochimica Et Biophysica Acta (Bba) - Bioenergetics, Elsevier vol. 1863
01-09-2022 - mTOR-regulated mitochondrial metabolism limits mycobacterium-induced cytotoxicity
Pagán AJ Lee LJ Edwards-Hicks J Moens CB Busch-Nentwich EM Ramakrishnan L
Cell, Elsevier vol. 185 (20), 3720-3738.e13.
01-09-2022 - Multiple dimensions of biodiversity in paleotropical hotspots reveal comparable bat diversity
Tanshi I Obitte BC Monadjem A Rossiter SJ Fisher‐Phelps M Kingston T
Biotropica, Wiley vol. 54 (5), 1205-1216.
01-09-2022 - Ecological constraints on highly evolvable olfactory receptor genes and morphology in neotropical bats
Yohe LR Fabbri M Lee D Davies KTJ Yohe TP Sánchez MKR Rengifo EM Hall RP et al.
Evolution, Oxford University Press (OUP) vol. 76 (10), 2347-2360.
30-08-2022 - Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides
Escudero Castelán N Semmens DC Guerra LAY Zandawala M dos Reis M Slade SE Scrivens JH Zampronio CG et al.
Bmc Biology, Springer Nature vol. 20 (1)
24-08-2022 - Estimating effects of parents’ cognitive and non-cognitive skills on offspring education using polygenic scores
Demange PA Hottenga JJ Abdellaoui A Eilertsen EM Malanchini M Domingue BW Armstrong-Carter E de Zeeuw EL et al.
Nature Communications, Springer Nature vol. 13 (1)
23-08-2022 - Strategic nest site selection in one of the world's largest loggerhead turtle nesting colonies, on Maio Island, Cabo Verde
Patino-Martinez J Dos Passos L Amador R Teixidor A Cardoso S Marco A Koenen F Dierickx EG et al.
Oryx, Cambridge University Press (Cup) vol. 57 (2), 152-159.
01-08-2022 - Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability
de Mendoza A Nguyen TV Ford E Poppe D Buckberry S Grimmer MR Stolzenburg S Bogdanovic O et al.
Genome Biology, Springer Nature vol. 23 (1)
26-07-2022 - Copy number changes in co-expressed odorant receptor genes enable selection for sensory differences in drosophilid species
Auer TO Álvarez-Ocaña R Cruchet S
Nature Ecology & Evolution, Springer Nature vol. 6 (9), 1343-1353.
21-07-2022 - Uncovering the enigmatic evolution of bears in greater depth: The hybrid origin of the Asiatic black bear
Zou T Kuang W Yin T Frantz L Liu J
Proceedings of The National Academy of Sciences of The United States of America, Proceedings of The National Academy of Sciences vol. 119 (31)
18-07-2022 - Quantity as a Fish Views It: Behavior and Neurobiology
Messina A Potrich D Perrino M Sheardown E Petrazzini MEM Luu P Nadtochiy A Truong TV et al.
Frontiers in Neuroanatomy, Frontiers vol. 16
14-07-2022 - The consequences of a year of the COVID-19 pandemic for the mental health of young adult twins in England and Wales
Rimfeld K Malanchini M Arathimos R Gidziela A Pain O McMillan A Ogden R Webster L et al.
Bjpsych Open, Royal College of Psychiatrists vol. 8 (4)
01-07-2022 - Grey wolf genomic history reveals a dual ancestry of dogs
Bergström A Stanton DWG Taron UH Frantz L Sinding M-HS Ersmark E Pfrengle S Cassatt-Johnstone M et al.
Nature, Springer Nature vol. 607 (7918), 313-320.
29-06-2022 - Genome-wide local ancestry and evidence for mitonuclear coadaptation in African hybrid cattle populations
Ward JA McHugo GP Dover MJ Ng'ang'a SI Sonstegard TS Bradley DG
Iscience, Elsevier vol. 25 (7)
26-06-2022 - Molecular Evolution of Far-Red Light-Acclimated Photosystem II
Gisriel CJ Cardona T Bryant DA Brudvig GW
Microorganisms, Mdpi vol. 10 (7)
22-06-2022 - Loss of slc39a14 causes simultaneous manganese hypersensitivity and deficiency in zebrafish
Tuschl K White RJ Trivedi C Valdivia LE Niklaus S Dadswell C González-Méndez R Sealy IM
Disease Models and Mechanisms, The Company of Biologists vol. 15 (6)
15-06-2022 - Convergent evolution of a labile nutritional symbiosis in ants
Jackson R Monnin D Patapiou PA Golding G Helanterä H Oettler J Heinze J Wurm Y et al.
The Isme Journal: Multidisciplinary Journal of Microbial Ecology, Oxford University Press (OUP) vol. 16 (9), 2114-2122.
14-06-2022 - The biocultural origins and dispersal of domestic chickens
Peters J Lebrasseur O Irving-Pease EK Paxinos PD Best J Smallman R Gardeisen A Trixl S et al.
Proceedings of The National Academy of Sciences of The United States of America, Proceedings of The National Academy of Sciences vol. 119 (24)
06-06-2022 - Riparian buffers can help mitigate biodiversity declines in oil palm agriculture
Deere NJ Bicknell JE Mitchell SL Afendy A Baking EL Bernard H Chung AY Ewers RM et al.
Frontiers in Ecology and The Environment, Wiley vol. 20 (8), 459-466.
31-05-2022 - Multifaceted control of E-cadherin dynamics by Adaptor Protein Complex 1 during epithelial morphogenesis
Moreno MR Boswell K Casbolt HL
Molecular Biology of The Cell, American Society For Cell Biology (Ascb) vol. 33 (9), ar80-ar80.
24-05-2022 - The elusive role of prolactin in the sociality of the naked mole-rat
Gilbert JD Rossiter SJ Bennett NC Faulkes CG
Hormones and Behavior, Elsevier vol. 143
19-05-2022 - Fast and accurate estimation of multidimensional site frequency spectra from low-coverage high-throughput sequencing data
Mas-Sandoval A Pope NS Nielsen KN Altinkaya I Fumagalli M Korneliussen TS
Gigascience vol. 11
17-05-2022 - Context-dependent parasite infection affects trophic niche in populations of sympatric stickleback species
Thorburn D-MJ Bal TMP Deflem IS Volckaert FAM
Parasitology, Cambridge University Press (Cup) vol. 149 (9), 1164-1172.
16-05-2022 - Local‐scale temperature gradients driven by human disturbance shape the physiological and morphological traits of dung beetle communities in a Bornean oil palm–forest mosaic
Williamson J Teh E Jucker T Brindle M Bush E Chung AYC Parrett J Lewis OT et al.
Functional Ecology, Wiley vol. 36 (7), 1655-1667.
09-05-2022 - Nutrient-Response Pathways in Healthspan and Lifespan Regulation
Dabrowska A Kumar J Rallis C
Cells, Mdpi vol. 11 (9)
06-05-2022 - Individual-based Modeling of Genome Evolution in Haplodiploid Organisms
Pracana R Burns R Hammond RL Haller BC Wurm Y
Genome Biology and Evolution, Oxford University Press (OUP) vol. 14 (5)
02-05-2022 - Stepwise-edited, human melanoma models reveal mutations’ effect on tumor and microenvironment
Hodis E Torlai Triglia E Kwon JYH Biancalani T Zakka LR Parkar S Hütter J-C Buffoni L et al.
Science, American Association For The Advancement of Science (Aaas) vol. 376 (6592), eabi8175-eabi8175.
29-04-2022 - ERK1/2 is an ancestral organising signal in spiral cleavage
Seudre O Liang Y
Nature Communications, Springer Nature vol. 13 (1)
28-04-2022 - Transcriptional and post-transcriptional regulation of checkpoint genes on the tumour side of the immunological synapse
Dobosz P Stempor PA Ramírez Moreno M
Heredity, Springer Nature vol. 129 (1), 64-74.
22-04-2022 - Disentangling Signatures of Selection before and after European Colonization in Latin Americans
Mendoza-Revilla J Chacón-Duque JC Fuentes-Guajardo M Ormond L Wang K Hurtado M Villegas V Granja V et al.
Molecular Biology and Evolution vol. 39 (4)
19-04-2022 - Lifestyle Transitions in Fusarioid Fungi are Frequent and Lack Clear Genomic Signatures
Hill R Buggs RJA Gaya E
Molecular Biology and Evolution, Oxford University Press (OUP) vol. 39 (4)
11-04-2022 - Divergent and non-parallel evolution of MHC IIB in the Neotropical Midas cichlid species complex
Bracamonte SE Hofmann MJ Eizaguirre C
Bmc Ecology and Evolution, Springer Nature vol. 22 (1)
01-04-2022 - Genetic and Environmental Factors of Non-Ability-Based Confidence
Vogt RL Zheng A Briley DA Malanchini M Harden KP Tucker-Drob EM
Social Psychological and Personality Science Social Psychological and Personality Science. vol. 13 (3), 734-746.
01-04-2022 - Expert range maps of global mammal distributions harmonised to three taxonomic authorities
Marsh CJ Sica YV Burgin CJ Dorman WA Anderson RC del Toro Mijares I Vigneron JG Barve V et al.
Journal of Biogeography, Wiley vol. 49 (5), 979-992.
27-03-2022 - Recurring adaptive introgression of a supergene variant that determines social organization
Stolle E Pracana R López-Osorio F Priebe MK Hernández GL Castillo-Carrillo C Arias MC Paris CI et al.
Nature Communications, Springer Nature vol. 13 (1)
11-03-2022 - Author Correction: STORM imaging reveals the spatial arrangement of transition zone components and IFT particles at the ciliary base in Tetrahymena
Hazime KS Zhou Z Joachimiak E
Scientific Reports, Springer Nature vol. 12 (1)
07-03-2022 - Reconfiguring Darwin’s abominable mystery
Buggs RJA
Nature Plants, 1-2.
03-03-2022 - The era of reference genomes in conservation genomics.
Formenti G Theissinger K Fernandes C Bista I Bombarely A Bleidorn C Ciofi C Crottini A et al.
Trends Ecol Evol vol. 37 (3), 197-202.
01-03-2022 - Genetic influences on neurodevelopmental disorders and their overlap with co-occurring conditions in childhood and adolescence: A meta-analysis
Gidziela A Ahmadzadeh YI Michelini G Allegrini AG Agnew-Blais J Lau LY Duret M Procopio F et al.
, Cold Spring Harbor Laboratory
21-02-2022 - Allele-specific gene expression can underlie altered transcript abundance in zebrafish mutants
White RJ Mackay E Wilson SW
Elife, Elife vol. 11
17-02-2022 - Correction to: Global distribution of a chlorophyll f cyanobacterial marker
Antonaru LA Cardona T Larkum AWD Nürnberg DJ
The Isme Journal: Multidisciplinary Journal of Microbial Ecology, Oxford University Press (OUP) vol. 16 (6), 1680-1680.
15-02-2022 - The structure of tropical bat–plant interaction networks during an extreme El Niño‐Southern Oscillation event
Oliveira HFM Pinheiro RBP Varassin IG Rodríguez‐Herrera B Kuzmina M Rossiter SJ Clare EL
Molecular Ecology, Wiley vol. 31 (6), 1892-1906.
15-02-2022 - Somatostatin-type and allatostatin-C–type neuropeptides are paralogous and have opposing myoregulatory roles in an echinoderm
Zhang Y Yañez-Guerra LA Tinoco AB Castelán NE Egertová M Elphick MR
Proceedings of The National Academy of Sciences of The United States of America, Proceedings of The National Academy of Sciences vol. 119 (7)
10-02-2022 - Characterizing ontogeny of quantity discrimination in zebrafish
Sheardown E Torres-Perez JV Anagianni S Fraser SE Vallortigara G Butterworth B Miletto-Petrazzini ME Brennan CH
Proceedings of The Royal Society B, The Royal Society vol. 289 (1968)
09-02-2022 - Alternative splicing in seasonal plasticity and the potential for adaptation to environmental change
Steward RA de Jong MA Oostra V
Nature Communications, Springer Nature vol. 13 (1)
08-02-2022 - Ankk1 Loss of Function Disrupts Dopaminergic Pathways in Zebrafish
Leggieri A García-González J Torres-Perez JV Havelange W Hosseinian S Mech AM Keatinge M Busch-Nentwich EM et al.
Frontiers in Neuroscience, Frontiers vol. 16
08-02-2022 - The genetics of specific cognitive abilities
Procopio F Zhou Q Wang Z Gidziela A Rimfeld K Malanchini M Plomin R
, Cold Spring Harbor Laboratory
08-02-2022 - ScreenGarden: a shinyR application for fast and easy analysis of plate-based high-throughput screens
Klemm C Thorpe PH
Bmc Bioinformatics, Springer Nature vol. 23 (1), 60-60.
05-02-2022 - Translational relevance of forward genetic screens in animal models for the study of psychiatric disease
Sheardown E Mech AM Petrazzini MEM Leggieri A Gidziela A Hosseinian S Sealy IM Torres-Perez JV et al.
Neuroscience and Biobehavioral Reviews, Elsevier vol. 135
04-02-2022 - Genomic Signatures of Recent Adaptation in a Wild Bumblebee
Colgan TJ Arce AN Gill RJ Rodrigues AR Kanteh A Duncan EJ Li L Chittka L et al.
Molecular Biology and Evolution, Oxford University Press (OUP) vol. 39 (2)
03-02-2022 - Natural and human-driven selection of a single non-coding body size variant in ancient and modern canids
Plassais J vonHoldt BM Parker HG Carmagnini A Dubos N Papa I Bevant K Derrien T et al.
Current Biology, Elsevier vol. 32 (4), 889-897.e9.
31-01-2022 - Whi3 mnemon association with endoplasmic reticulum membranes confines the memory of deceptive courtship to the yeast mother cell
Lau Y Oamen HP Grogg M Parfenova I Saarikangas J Hannay R Nichols RA Hilvert D et al.
Current Biology, Elsevier vol. 32 (5), 963-974.e7.
31-01-2022 - The Cross-Talk Between EGFR and E-Cadherin
Moreno MR
Frontiers in Cell and Developmental Biology, Frontiers vol. 9
20-01-2022 - Improved chromosome-level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) integrating Pacific Biosciences long reads and a high-density linkage map
Smolander O-P Blande D Ahola V Rastas P Tanskanen J Kammonen JI Oostra V Pellegrini L et al.
Gigascience, Oxford University Press (OUP) vol. 11 (1)
12-01-2022 - Behavioral and Gene Regulatory Responses to Developmental Drug Exposures in Zebrafish
Mech AM Merteroglu M Sealy IM Teh M-T White RJ Havelange W Brennan CH Busch-Nentwich EM
Frontiers in Psychiatry, Frontiers vol. 12
10-01-2022 - Cyto-nuclear incompatibilities across a bluebell hybrid zone in northern Spain do not prevent genome-wide introgression of neutral markers
Marquardt J Blanckaert A Nichols RA Ansell SW Ruhsam M Hollingsworth PM Metzler D Schneider H et al.
Evolutionary Journal of The Linnean Society, Oxford University Press (OUP) vol. 1 (1)
01-01-2022 - Fourth Report on Chicken Genes and Chromosomes 2022
Smith J Alfieri JM Anthony N Arensburger P Athrey GN Balacco J Balic A Bardou P et al.
Cytogenetic and Genome Research, Karger Publishers vol. 162 (8-9), 405-528.
01-01-2022 - POSB338 Identification of Meaningful Aspects of Physical Activity: Concept Elicitation By AI-Assisted Coding of Online Patient Conversations
Bridges Y Chowdhury M Tahsin A Bessant C Abdollahyan M
Value in Health, Elsevier vol. 25 (1)
01-01-2022 - Total Nucleic Acid Extraction from Single Zebrafish Embryos for Genotyping and RNA-seq.
Wali N Merteroglu M White RJ
Bio-Protocol, Bio-Protocol vol. 12 (1)
01-01-2022