Publications

 
  • Reconstructing the last common ancestor of all eukaryotes.
    Richards TA Eme L Archibald JM Leonard G Coelho SM de Mendoza A Dessimoz C Dolezal P et al.
    Plos Biology, Public Library of Science (Plos) vol. 22 (11), e3002917-e3002917.  
    25-11-2024
  • The emergence of Sox and POU transcription factors predates the origins of animal stem cells
    Gao Y Tan DS Girbig M Hu H Zhou X Xie Q Yeung SW Lee KS et al.
    Nature Communications, Springer Nature vol. 15 (1) 
    14-11-2024
  • Zebrafish are resilient to the loss of major diacylglycerol acyltransferase enzymes
    Wilson MH Hensley MR Shen M-C Lu H-Y Quinlivan VH
    Journal of Biological Chemistry, Elsevier Bv, 107973-107973.  
    05-11-2024
  • Bayesian Selection of Relaxed-clock Models: Distinguishing Between Independent and Autocorrelated Rates.
    Panchaksaram M, Freitas L and Dos Reis M
    Systematic Biology 
    01-11-2024
  • Discovery of a neuropeptide that acts as an autotomy-promoting factor
    Tinoco A Kirupakaran V Capatina D Egertová M Elphick M
    Current Biology, Cell Press 
    29-08-2024
  • A feather star is born: embryonic development and nervous system organization in the crinoid Antedon mediterranea
    Mercurio S Gattoni G Scarì G Ascagni M Barzaghi B Elphick MR Croce JC Schubert M et al.
    Open Biology, The Royal Society vol. 14 (8), 240115-240115.  
    21-08-2024
  • Annelid methylomes reveal ancestral developmental and aging-associated epigenetic erosion across Bilateria
    Guynes K Sarre LA Carrillo-Baltodano AM Davies BE Xu L Liang Y Martín-Zamora FM Hurd PJ et al.
    Genome Biology, Springer Nature vol. 25 (1), 204-204.  
    01-08-2024
  • Nitrogen and phosphorus interactions at a 21 nitrogen:1 phosphorus Redfield‐like ratio impact growth and seed yield in wheat (Triticum aestivum L.)
    da Silva SSM Faizullah L Guignard MS Orcen N Ruban AV Rudall PJ Trimmer M Nichols RA et al.
    Food and Energy Security, Wiley vol. 13 (4) 
    30-07-2024
  • DNA methylation enables recurrent endogenization of giant viruses in an animal relative
    Sarre LA Kim IV Ovchinnikov V Olivetta M Suga H Dudin O
    Science Advances, American Association For The Advancement of Science (Aaas) vol. 10 (28), eado6406-eado6406.  
    12-07-2024
  • Specific DNMT3C flanking sequence preferences facilitate methylation of young murine retrotransposons
    Dossmann L Emperle M Dukatz M de Mendoza A
    Communications Biology, Springer Nature vol. 7 (1) 
    16-05-2024
  • Dissecting Bayes: Using influence measures to test normative use of probability density information derived from a sample
    Ota K Maloney LT
    Plos Computational Biology, Public Library of Science (Plos) vol. 20 (5) 
    01-05-2024
  • Simultaneous Inference of Past Demography and Selection from the Ancestral Recombination Graph under the Beta Coalescent
    Korfmann K Sellinger TPP Freund F Fumagalli M Tellier A
    Peer Community Journal, Peer Community In vol. 4 
    18-03-2024
  • Pla2g12b drives expansion of triglyceride-rich lipoproteins
    Thierer JH Foresti O Yadav PK Wilson MH Moll TOC Shen M-C Busch-Nentwich EM Morash M et al.
    Nature Communications, Springer Nature vol. 15 (1), 2095-2095.  
    07-03-2024
  • The development of the adult nervous system in the annelid Owenia fusiformis
    Carrillo-Baltodano AM Donnellan RD Williams EA Jékely G
    Neural Development, Springer Nature vol. 19 (1) 
    21-02-2024
  • Evolution of chemosensory tissues and cells across ecologically diverse Drosophilids
    Bontonou G Saint-Leandre B Kafle T Hassan A
    Nature Communications, Nature Research vol. 15 (1047) 
    05-02-2024
  • Neuropeptide expression and action in the reproductive system of the starfish Asterias rubens
    Piñon Gonzalez V Feng Y Egertová M Elphick M
    The Journal of Comparative Neurology, Wiley 
    27-01-2024
  • Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences
    Yu D Ren Y Uesaka M Beavan AJS Muffato M Shen J Li Y Wan W et al.
    Nature Ecology & Evolution, Springer Nature vol. 8 (3), 519-535.  
    12-01-2024